Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918415.1_cds_XP_016467857.1_60561
CDS Infomation

[gene=LOC107790445] [db_xref=GeneID:107790445] [protein=beta-glucosidase 44-like] [protein_id=XP_016467857.1] [location=complement(join(12138..12415,12528..12630,12906..12937,13041..13258,13360..13475,13871..14123,14421..14508,14721..14792,14896..14971,16619..16677,16772..17018))] [gbkey=CDS]
Sequence

ATGATCAATAAAGCCACTCCATTGCTGTTTTTGCCGCTTCTTGTGATAATATTAAGCACT
TTAACTCTCATTCAGAGCGATAATGTGTTGCCAGAGACGACGGTTTTCGACACCGGAGGG
TTGAGCAGAGACAGCTTTCCAAAGGATTTTGTGTTTGGAACATCAACTTCTGCTTATCAA
GTTGAAGGTGCAGCCAGTAAAGATGGCCGTGGACCTAGTGTCTGGGACACTTTCATAAAA
AAGCCAGGACGTGAGCCCAATAATGCAAGTGGAGAGGTCTCTGCGGACCAGTACCATCGT
TATAAAGAAGATATTGATCTAATGGTGAAGCTGAACTTTGATGCTTACCGTTTCTCAATT
TCTTGGTCCAGGATTTTCCCAAATGGAACTGGAAAAATTAACTGGAAGGGAGTTGCTTAT
TACAACAGGTTGATTGACTATATGCTCAAAAAAGGCATTACTTCATATGTTAATCTTAAT
CACTACGATTTACCTCAAGCACTTCAAGATAAGTACAAGGGATGGTTGAGTCATGAAGTC
GTGAAAGATTTTGCTGATTATGCAGAATTTTGCTTCAAAGCATATGGAGACAGAGTCAAG
AATTGGTTCTCATTTAATGAACCAAGAGTTGTTGCTGATCTTGGGTATAACACTGGGTAC
TTTGCACCTGGTAGGTGCTCCAAAGCATTTGGCAATTGTATATCAGGGGATTCTGCAACT
GAGCCATATATTGTTGCACATAATCTAATATTGAGCCATGCTGCTGCAGCTCAGAGATAT
CGCGATAAGTATCAAGAGAAACAGAAGGGAAAATTTGGAATTATCTTGGATTTTGTTTGG
TTTGAACCTCTGACTAGATCCAAAGTGGACAATTATGCTGCTCAAAGAGCAAGAGACTTT
GAATTGGGATGGTTTTTGCATCCTCTAGTATATGGAGAGTACCCCAAAACCATGCAAAAT
ATTGTTGGAAATCGATTACCCAAATTCACAAAAGAAGAGGTTAAGATGGTCAAAGGGTCA
ATTGATTATGTGGGCATAAACCATTATACTACCTTCTACGCATTTGATCGCCATCTATCC
AAACCAAAAGCCCTTGGCTACCGTCAGGACTGGAATTGTGCATTTGCTTATGATCGCAAG
GGAGTACCAATTGGTCCTAGGGCGCACTCCGACTGGCTCTATATTGTGCCTTGGGGTCTA
TACAAAGCTGTCAACTATGTAAAAGAACACTATGGAAATCCTACCATCATTTTATCAGAA
AATGGTATGGATTATGCAGGCAATATTTCCCTTCCTGAAGCTTTGCAGGACACCAAAAGG
ACTGATTACTACAGAAGCTATTTGGCCGAACTGAAGAAGGCTATCGTTGAAGGAGCTAAT
GTCACAGGCTACTTCGCGTGGTCATTGCTCGACAACTTTGAGTGGAGACGGGGTTATACT
TCTAGATTTGGTATAATCTATGTTGATTACAGAACACTCAAGCGATATCCGAAGATGTCA
GCCTATTGGTTCAAGCAATTACTTCAACACCATATGCATTAA

Peptide Sequence

PEP ID

XP_016467857.1
PEP Infomation

PREDICTED: beta-glucosidase 44-like [Nicotiana tabacum]
Sequence

MINKATPLLFLPLLVIILSTLTLIQSDNVLPETTVFDTGGLSRDSFPKDFVFGTSTSAYQ
VEGAASKDGRGPSVWDTFIKKPGREPNNASGEVSADQYHRYKEDIDLMVKLNFDAYRFSI
SWSRIFPNGTGKINWKGVAYYNRLIDYMLKKGITSYVNLNHYDLPQALQDKYKGWLSHEV
VKDFADYAEFCFKAYGDRVKNWFSFNEPRVVADLGYNTGYFAPGRCSKAFGNCISGDSAT
EPYIVAHNLILSHAAAAQRYRDKYQEKQKGKFGIILDFVWFEPLTRSKVDNYAAQRARDF
ELGWFLHPLVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDYVGINHYTTFYAFDRHLS
KPKALGYRQDWNCAFAYDRKGVPIGPRAHSDWLYIVPWGLYKAVNYVKEHYGNPTIILSE
NGMDYAGNISLPEALQDTKRTDYYRSYLAELKKAIVEGANVTGYFAWSLLDNFEWRRGYT
SRFGIIYVDYRTLKRYPKMSAYWFKQLLQHHMH

Transcript Sequence

Gene sequence data has not been registered.